Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922044.1_cds_XP_016470865.1_63268
CDS Infomation

[gene=LOC107793094] [db_xref=GeneID:107793094] [protein=BTB/POZ domain-containing protein NPY1-like] [protein_id=XP_016470865.1] [location=complement(join(8418..8963,9485..10651,12210..12279,14816..14877))] [gbkey=CDS]
Sequence

ATGAAGTTCATGAAGTTGGGATCAAAACCCGATACATTTCAAGATCAAGGAAAAGGTGTA
AGGTACGTGTCATCGGAACTGGCATCAGATGTTACCATCATTATTGGTGAAGTGAAGTTT
TATCTTCACAAGTTTCCTCTGTTGTCCAAGAGCAACAGGCTGCAAAGGCTTGTTTCAAAA
GCAAATGAAGAGGATTCTGGTGAAATGCAGTTAGTTGATTTTCCTGGTGGACCTAAAGCT
TTTGAGATTTGCGCCAAATTTTGCTACGGAATGACAGTGACTCTCAATCCTTACAATGTT
GTTGCTGCACGTTGTGCGGCTGAGTACCTTGAGATGACTGAAGATGCTGACCGTGGAAAT
CTTATCTTCAAAATCGAGGTATTCCTTAATTCTAGCGTTTTCCGCAGCTGGAAAGATTCG
ATCATTGTTTTACAAACCACCAAATCTCTTCTGCCGTGGTCTGAAGATCTGAAGGTGGTC
GGGAGATGTATAGATTCTATTGCATCCAAAACTTCAATGGATCCGTCGACTATTACATGG
TCCTACACTTATAACAGAAAAGTGGCAGTCTCAGATAGGATCACAGAAGTTGGGGTAAAA
TTCCCTGTAAACCTTGAATCTGTGCCTAAGGATTGGTGGGCTGAAGATATATGTGAACTT
GAGATAGATCTTTACAAGCGAGTTATGATCGCGGTTAAAGCTAAGGGAAGAATGGATGGC
AATGTTATTGGCGAGGCACTAAGAACTTATGCAATGAGATGGTTGCCTGATTCTATTGAA
GCTTTGGTATCTGAAGCCCACAGTAGGAGGAACAAGTCCTTGTTAGAGACAATAATCTGC
TTATTGCCTTCTGACAAGGGCGTTACTTGTTCGTGTGGCTTCTTGCTTAAGTTATTGAAA
GTCGCTATTCTTGTGGGAGCGGATGATTCATCACGGGAAGATCTTATAAGAAGTATCAGC
TTAAAGCTGGACGAGGCTTCCGTCAATGATCTTTTGATTCCATCAAGGTCTCCTCAAACT
ACTGTTTACGATGTTGAACTAGTGAAGTGCCTAGTGGACCGATTCATGGCTCGTGAAAGA
AGCCGGGATAAGAACATTTCTGCAAAGAGCACCAATGATTTCGTCTTGGGGCATGGGTCA
TGGTTGAAAGTTGGTAAATTAGTTGATGGCTATCTTACAGAAATTGCACGTGATCCAAAC
GTCAGTCTATCGAGTTTCATTGAACTGTTGCAATCCGTTCCAGACTCAGCAAGACCGATC
CATGATGCATTATATGGGGCAATTGATATCTATTTGCAGGAGCACTCAAGCTTGACAAAA
GCTGAGAAAAAGCATTTATGTGGCCTAATGGATGTGAGGAAATTAACAATGGATGCATCT
ATGCATGCAGCACAAAATGAACGGCTGCCTCTCCGAACTGTTGTTCAAGTCCTTTTCTTT
GAGCAAATTAGAGCAGCTGCTGGAGTTCAAGCCTTAAACAACAGAAACAGTAATGCCTTA
GATTCCACTAGGAAGACTGAAGAATATTGGCAGAAAACATTGCCAGAAAAGCACAATGTG
TCGAAACCATCGAGTGTAATGAAGGTAAAAGATGAAAATCCACAAAAGAACATGAAGTTG
GTAAAAAAGGGTAGTAAAAACAGAAGTAGTGGTGCACAGTTGCTGCCTTCAAGATCAAGA
AGAATATTTGACAAGCTGTTTGTTGTTGGTAAGGTGTCTGGTAACGTCGAAAACCGGAGC
TCTGAGACATCTGGTAGTTCTCATAGTCCAACTTCAATGATTATTAAAGGAGAAATTAAG
TCTTCTGGTTCATCTTCAAGAAACAGGAGGCATTCAATTTCATAA

Peptide Sequence

PEP ID

XP_016470865.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein NPY1-like [Nicotiana tabacum]
Sequence

MKFMKLGSKPDTFQDQGKGVRYVSSELASDVTIIIGEVKFYLHKFPLLSKSNRLQRLVSK
ANEEDSGEMQLVDFPGGPKAFEICAKFCYGMTVTLNPYNVVAARCAAEYLEMTEDADRGN
LIFKIEVFLNSSVFRSWKDSIIVLQTTKSLLPWSEDLKVVGRCIDSIASKTSMDPSTITW
SYTYNRKVAVSDRITEVGVKFPVNLESVPKDWWAEDICELEIDLYKRVMIAVKAKGRMDG
NVIGEALRTYAMRWLPDSIEALVSEAHSRRNKSLLETIICLLPSDKGVTCSCGFLLKLLK
VAILVGADDSSREDLIRSISLKLDEASVNDLLIPSRSPQTTVYDVELVKCLVDRFMARER
SRDKNISAKSTNDFVLGHGSWLKVGKLVDGYLTEIARDPNVSLSSFIELLQSVPDSARPI
HDALYGAIDIYLQEHSSLTKAEKKHLCGLMDVRKLTMDASMHAAQNERLPLRTVVQVLFF
EQIRAAAGVQALNNRNSNALDSTRKTEEYWQKTLPEKHNVSKPSSVMKVKDENPQKNMKL
VKKGSKNRSSGAQLLPSRSRRIFDKLFVVGKVSGNVENRSSETSGSSHSPTSMIIKGEIK
SSGSSSRNRRHSIS

Transcript Sequence

Gene sequence data has not been registered.